Biosystems and Agricultural Engineering

Publications 1976 2018

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2018

Anaerobic co-digestion of multiple agricultural residues to enhance biogas production in southern Italy

Valenti, F., Zhong, Y., Sun, M., Porto, S. M. C., Toscano, A., Dale, B. E., Sibilla, F. & Liao, W. Aug 1 2018 In : Waste Management. 78, p. 151-157 7 p.

Research output: Contribution to journalArticle

Agricultural wastes
Biogas
biogas
Feedstocks
digestion
Silicate minerals
Food supply
Food Chain
Food Supply
Biosensing Techniques
1 Citations

Case study: Fixture water use and drinking water quality in a new residential green building

Salehi, M., Abouali, M., Wang, M., Zhou, Z., Nejadhashemi, A. P., Mitchell, J., Caskey, S. & Whelton, A. J. Mar 1 2018 In : Chemosphere. 195, p. 80-89 10 p.

Research output: Contribution to journalArticle

Water Quality
Drinking Water
Water
Sanitary Engineering
Gene Dosage

Characterization of individual human antibodies that bind pertussis toxin stimulated by acellular immunization

Acquaye-Seedah, E., Reczek, E. E., Russell, H. H., DiVenere, A. M., Sandman, S. O., Collins, J. H., Stein, C. A., Whitehead, T. A. & Maynard, J. A. Jun 1 2018 In : Infection and Immunity. 86, 6, e00004-18

Research output: Contribution to journalArticle

Pertussis Toxin
Immunization
Antibodies
Whooping Cough
Acellular Vaccines
1 Citations

Control of hydrolytic degradation of Poly(lactic acid) by incorporation of chain extender: From bulk to surface erosion

Iñiguez-Franco, F., Auras, R., Ahmed, J., Selke, S., Rubino, M., Dolan, K. & Soto-Valdez, H. May 1 2018 In : Polymer Testing. 67, p. 190-196 7 p.

Research output: Contribution to journalArticle

Polymer blends
Lactic acid
Erosion
Rate constants
Thermodynamic stability
1 Citations

Cytochrome-P450-Induced Ordering of Microsomal Membranes Modulates Affinity for Drugs

Barnaba, C., Sahoo, B. R., Ravula, T., Medina-Meza, I. G., Im, S. C., Anantharamaiah, G. M., Waskell, L. & Ramamoorthy, A. Mar 19 2018 In : Angewandte Chemie - International Edition. 57, 13, p. 3391-3395 5 p.

Research output: Contribution to journalArticle

Slip forming
Biophysics
Water recycling
Chemical cleaning
Mammals
4 Citations

Direct colorimetric detection of unamplified pathogen DNA by dextrin-capped gold nanoparticles

Baetsen-Young, A. M., Vasher, M., Matta, L. L., Colgan, P., Alocilja, E. C. & Day, B. Mar 15 2018 In : Biosensors and Bioelectronics. 101, p. 29-36 8 p.

Research output: Contribution to journalArticle

Pathogens
Gold
Nanoparticles
DNA
Single-Stranded DNA
Blueberry Plants
Vaccinium corymbosum
blueberries
Anthocyanins
juices

Evaluating the role of evapotranspiration remote sensing data in improving hydrological modeling predictability

Herman, M. R., Nejadhashemi, A. P., Abouali, M., Hernandez-Suarez, J. S., Daneshvar, F., Zhang, Z., Anderson, M. C., Sadeghi, A. M., Hain, C. R. & Sharifi, A. Jan 1 2018 In : Journal of Hydrology. 556, p. 39-49 11 p.

Research output: Contribution to journalArticle

hydrological modeling
evapotranspiration
remote sensing
streamflow
calibration

Global Distribution of Human-Associated Fecal Genetic Markers in Reference Samples from Six Continents

Mayer, R. E. , Reischer, G. H. , Ixenmaier, S. K. , Derx, J. , Blaschke, A. P. , Ebdon, J. E. , Linke, R. , Egle, L. , Ahmed, W. , Blanch, A. R. , Byamukama, D. , Savill, M. , Mushi, D. , Cristóbal, H. A. , Edge, T. A. , Schade, M. A. , Aslan, A. , Brooks, Y. M. , Sommer, R. , Masago, Y. & 10 others Sato, M. I., Taylor, H. D., Rose, J. B., Wuertz, S., Shanks, O. C., Piringer, H., Mach, R. L., Savio, D., Zessner, M. & Farnleitner, A. H. May 1 2018 In : Environmental Science and Technology. 52, 9, p. 5076-5084 9 p.

Research output: Contribution to journalArticle

reference sample
genetic marker
Wastewater
Pollution
Water

Hydrogen network optimization by integrating impurity distributions of a fluid catalytic cracker and hydrogenation reaction kinetics

Wu, L., Liang, X., Kang, L., Liu, Y. & Saffron, C. M. Aug 10 2018 In : Journal of Cleaner Production. 192, p. 542-552 11 p.

Research output: Contribution to journalArticle

reaction kinetics
Reaction kinetics
Hydrogenation
Fluid catalytic cracking
hydrogen

Inoculation protocols influence the thermal resistance of salmonella Enteritidis PT 30 in fabricated almond, wheat, and date products

Limcharoenchat, P., Buchholz, S. E., James, M. K., Hall, N. O., Ryser, E. T. & Marks, B. P. Apr 1 2018 In : Journal of food protection. 81, 4, p. 606-613 8 p.

Research output: Contribution to journalArticle

Salmonella enteritidis
Salmonella Enteritidis
almonds
Ointments
Salmonella

Integrated experimental and technoeconomic evaluation of two-stage Cu-catalyzed alkaline-oxidative pretreatment of hybrid poplar

Bhalla, A., Fasahati, P., Particka, C. A., Assad, A. E., Stoklosa, R. J., Bansal, N., Semaan, R., Saffron, C. M., Hodge, D. B. & Hegg, E. L. May 17 2018 In : Biotechnology for Biofuels. 11, 1, 143

Research output: Contribution to journalArticle

Hydrolysis
Temperature
Ethanol
Costs and Cost Analysis
Water

Migration of antioxidants from polylactic acid films, a parameter estimation approach: Part I – A model including convective mass transfer coefficient

Samsudin, H., Auras, R., Burgess, G., Dolan, K. & Soto-Valdez, H. Mar 1 2018 In : Food Research International. 105, p. 920-929 10 p.

Research output: Contribution to journalArticle

polylactic acid
partition coefficients
Antioxidants
mass transfer
Polymer films
Cucumis sativus
Fruits
Glycerol
Freezing
Fermentation

Pro region engineering of nerve growth factor by deep mutational scanning enables a yeast platform for conformational epitope mapping of anti-NGF monoclonal antibodies

Medina-Cucurella, A. V., Zhu, Y., Bowen, S. J., Bergeron, L. M. & Whitehead, T. A. Jan 1 2018 (Accepted/In press) In : Biotechnology and Bioengineering.

Research output: Contribution to journalArticle

Engine mountings
Hangars
Epitope Mapping
Epitopes
Monoclonal antibodies

Responses of Soybean to Water Stress and Supplemental Irrigation in Upper Indo-Gangetic Plain: Field Experiment and Modeling Approach

Jha, P. K., Kumar, S. N. & Ines, A. V. M. Apr 15 2018 In : Field Crops Research. 219, p. 76-86 11 p.

Research output: Contribution to journalArticle

water stress
soybean
irrigation
soybeans
modeling

Salmonella risks due to consumption of aquaculture-produced shrimp

Hamilton, K. A., Chen, A., de-Graft Johnson, E., Gitter, A., Kozak, S., Niquice, C., Zimmer-Faust, A. G., Weir, M. H., Mitchell, J. & Gurian, P. L. Jan 1 2018 (Accepted/In press) In : Microbial Risk Analysis.

Research output: Contribution to journalArticle

Aquaculture
Seafood
Salmonella
Cooking
Food Handling

Transformation, Conjugation, and Sequestration Following the Uptake of Triclocarban by Jalapeno Pepper Plants

Huynh, K., Banach, E. & Reinhold, D. Apr 25 2018 In : Journal of Agricultural and Food Chemistry. 66, 16, p. 4032-4043 12 p.

Research output: Contribution to journalArticle

Capsicum
pepper
uptake mechanisms
fruits
metabolites
2017

Applicability of Benford’s Law to Compliance Assessment of Self-Reported Wastewater Treatment Plant Discharge Data

Beiglou, P. H. B., Gibbs, C., Rivers, L., Adhikari, U. & Mitchell, J. 2017 (Accepted/In press) In : Journal of Environmental Assessment Policy and Management.

Research output: Contribution to journalArticle

compliance
Law
fraud
resource
wastewater treatment plant
1 Citations

Aquarium viromes: Viromes of human-Managed aquatic systems

Kim, Y., Van Bonn, W. V., Aw, T. G. & Rose, J. B. Jun 30 2017 In : Frontiers in Microbiology. 8, JUN, 1231

Research output: Contribution to journalArticle

Practice Management
Microbial Drug Resistance
Caudovirales
Ecosystem
Swimming Pools
4 Citations

A self-sustaining high-strength wastewater treatment system using solar-bio-hybrid power generation

Bustamante, M. & Liao, W. 2017 In : Bioresource Technology. 234, p. 415-423 9 p.

Research output: Contribution to journalArticle

Biofuels
Solar system
Biogas
biogas
power generation

Benign Fractionation of Lignin with CO2-Expanded Solvents of Acetic Acid + Water

Klett, A. S., Payne, A. M., Phongpreecha, T., Hodge, D. B. & Thies, M. C. Aug 30 2017 In : Industrial and Engineering Chemistry Research. 56, 34, p. 9778-9782 5 p.

Research output: Contribution to journalArticle

Lignin
Carbon Monoxide
Fractionation
Acetic acid
Acetic Acid
10 Citations
Blueberry Plants
Catechol Oxidase
Vaccinium corymbosum
heat inactivation
blueberries

Climate-Agriculture-Modeling and Decision Tool (CAMDT): A software framework for climate risk management in agriculture

Han, E., Ines, A. V. M. & Baethgen, W. E. Sep 1 2017 In : Environmental Modelling and Software. 95, p. 102-114 13 p.

Research output: Contribution to journalArticle

Risk management
Agriculture
Crops
agriculture
software
1 Citations

Comparing thermal process validation methods for salmonella inactivation on almond Kernels

Jeong, S., Marks, B. P. & James, M. K. Jan 1 2017 In : Journal of Food Protection. 80, 1, p. 169-176 8 p.

Research output: Contribution to journalArticle

almonds
Salmonella
inactivation
Hot Temperature
heat
7 Citations

Conversion of corn stover alkaline pre-treatment waste streams into biodiesel via Rhodococci

Le, R. K., Wells, T., Das, P., Meng, X., Stoklosa, R. J., Bhalla, A., Hodge, D. B., Yuan, J. S. & Ragauskas, A. J. 2017 In : RSC Advances. 7, 7, p. 4108-4115 8 p.

Research output: Contribution to journalArticle

Waste treatment
Biofuels
Alkalies
Biodiesel
Cellulosic ethanol

Corrigendum to "Effects of coffee processing residues on anaerobic microorganisms and corresponding digestion performance" [Bioresour. Technol. 245 (2017) 714-723]

Rojas-Sossa, J. P., Murillo-Roos, M., Uribe, L., Uribe-Lorio, L., Marsh, T., Larsen, N., Chen, R., Miranda, A., Solís, K., Rodriguez, W., Kirk, D. & Liao, W. Jan 1 2017 (Accepted/In press) In : Bioresource Technology.

Research output: Contribution to journalArticle

Coffee
coffee
Microorganisms
digestion
Genes
10 Citations

Development and evaluation of a comprehensive drought index

Esfahanian, E., Nejadhashemi, A. P., Abouali, M., Adhikari, U., Zhang, Z., Daneshvar, F. & Herman, M. R. Jan 1 2017 In : Journal of Environmental Management. 185, p. 31-43 13 p.

Research output: Contribution to journalArticle

Drought
drought
index
evaluation
Health
2 Citations

Development of a microbial dose response visualization and modelling application for QMRA modelers and educators

Weir, M. H., Mitchell, J., Flynn, W. & Pope, J. M. Feb 1 2017 In : Environmental Modelling and Software. 88, p. 74-83 10 p.

Research output: Contribution to journalArticle

visualization
Visualization
modeling
Maximum likelihood estimation
dose
downscaling
agriculture
climate
rainfall
weather
frozen vegetables
Brassica
broccoli
Brassica oleracea
Microwaves
2 Citations

Effect of nanoparticles on the hydrolytic degradation of PLA-nanocomposites by water-ethanol solutions

Iñiguez-Franco, F., Auras, R., Rubino, M., Dolan, K., Soto-Valdez, H. & Selke, S. Dec 1 2017 In : Polymer Degradation and Stability. 146, p. 287-297 11 p.

Research output: Contribution to journalArticle

Nanocomposites
nanocomposites
Ethanol
ethyl alcohol
degradation
1 Citations

Effects of coffee processing residues on anaerobic microorganisms and corresponding digestion performance

Rojas-Sossa, J. P., Murillo-Roos, M., Uribe, L., Uribe-Lorio, L., Marsh, T., Larsen, N., Chen, R., Miranda, A., Solís, K., Rodriguez, W., Kirk, D. & Liao, W. Dec 1 2017 In : Bioresource Technology. 245, p. 714-723 10 p.

Research output: Contribution to journalArticle

Methanogens
Coffee
Biofuels
Biogas
Methane
1 Citations

Effects of protein and lignin on cellulose and xylan anaylses of lignocellulosic biomass

MacLellan, J., Chen, R., Yue, Z., Kraemer, R., Liu, Y. & Liao, W. Jun 1 2017 In : Journal of Integrative Agriculture. 16, 6, p. 1268-1275 8 p.

Research output: Contribution to journalArticle

Xylans
Lignin
xylan
Cellulose
Biomass
Lubricating greases
Oils and fats
Wastewater
Enzymes
Soils
Vaccinium macrocarpon
cranberries
Anthocyanins
Ascorbic Acid
anthocyanins
1 Citations

Evaluating the significance of wetland restoration scenarios on phosphorus removal

Daneshvar, F., Nejadhashemi, A. P., Adhikari, U., Elahi, B., Abouali, M., Herman, M. R., Martinez-Martinez, E., Calappi, T. J. & Rohn, B. G. May 1 2017 In : Journal of Environmental Management. 192, p. 184-196 13 p.

Research output: Contribution to journalArticle

Wetlands
Restoration
Phosphorus
wetland
phosphorus

Evaluation of the Influenza Risk Reduction from Antimicrobial Spray Application on Porous Surfaces

Chabrelie, A., Mitchell, J., Rose, J., Charbonneau, D. & Ishida, Y. Jan 1 2017 (Accepted/In press) In : Risk Analysis.

Research output: Contribution to journalArticle

Risk Reduction Behavior
Human Influenza
Touch
Fomites
Disinfection

Evaluation of wetland implementation strategies on phosphorus reduction at a watershed scale

Abouali, M., Nejadhashemi, A. P., Daneshvar, F., Adhikari, U., Herman, M. R., Calappi, T. J. & Rohn, B. G. Sep 1 2017 In : Journal of Hydrology. 552, p. 105-120 16 p.

Research output: Contribution to journalArticle

wetland
watershed
phosphorus
targeting
eutrophication
3 Citations

Exploring eukaryotic formate metabolisms to enhance microbial growth and lipid accumulation

Liu, Z., Oyetunde, T., Hollinshead, W. D., Hermanns, A., Tang, Y. J., Liao, W. & Liu, Y. Jan 26 2017 In : Biotechnology for Biofuels. 10, 1, 22

Research output: Contribution to journalArticle

formic acid
Biofuels
Fatty acids
biofuel
Metabolism
3 Citations

Fine Epitope Mapping of Two Antibodies Neutralizing the Bordetella Adenylate Cyclase Toxin

Wang, X., Stapleton, J. A., Klesmith, J. R., Hewlett, E. L., Whitehead, T. A. & Maynard, J. A. Mar 7 2017 In : Biochemistry. 56, 9, p. 1324-1336 13 p.

Research output: Contribution to journalArticle

Adenylate Cyclase Toxin
Epitope Mapping
Neutralizing Antibodies
Epitopes
Antibodies
2 Citations

Identification of developmental stage and anatomical fraction contributions to cell wall recalcitrance in switchgrass

Crowe, J. D., Feringa, N., Pattathil, S., Merritt, B., Foster, C., Dines, D., Ong, R. G. & Hodge, D. B. Jul 15 2017 In : Biotechnology for Biofuels. 10, 1, 184

Research output: Contribution to journalArticle

Panicum
developmental stage
Cell Wall
Lignin
Cells
4 Citations

Insights into cellulase-lignin non-specific binding revealed by computational redesign of the surface of green fluorescent protein

Haarmeyer, C. N., Smith, M. D., Chundawat, S. P. S., Sammond, D. & Whitehead, T. A. Apr 1 2017 In : Biotechnology and Bioengineering. 114, 4, p. 740-750 11 p.

Research output: Contribution to journalArticle

Cellulase
Lignin
Green Fluorescent Proteins
Proteins
Adsorption

Inverse method to estimate anthocyanin degradation kinetic parameters in cherry pomace during non-isothermal heating

Greiby, I., Mishra, D. K., Dolan, K. D. & Siddiq, M. Apr 1 2017 In : Journal of Food Engineering. 198, p. 54-62 9 p.

Research output: Contribution to journalArticle

pomace
Anthocyanins
Heating
anthocyanins
heat

Microalgae cultivation for carbon dioxide sequestration and protein production using a high-efficiency photobioreactor system

Pavlik, D., Zhong, Y., Daiek, C., Liao, W., Morgan, R., Clary, W. & Liu, Y. Jul 1 2017 In : Algal Research. 25, p. 413-420 8 p.

Research output: Contribution to journalArticle

algae
microalgae
carbon sequestration
biomass
solar collectors

Microalgal Cultivation Using Animal Production Exhaust Air: Technical and Economic Feasibility

Li, Q. F., Liu, Y., Liao, W. & Powers, W. Apr 1 2017 In : Clean - Soil, Air, Water. 45, 4, 1500309

Research output: Contribution to journalArticle

Animals
Biomass
Nutrients
Economics
biomass
2 Citations

Migration of antioxidants from polylactic acid films: A parameter estimation approach and an overview of the current mass transfer models

Samsudin, H., Auras, R., Mishra, D., Dolan, K., Burgess, G., Rubino, M., Selke, S. & Soto-Valdez, H. 2017 (Accepted/In press) In : Food Research International.

Research output: Contribution to journalArticle

polylactic acid
mass transfer
films (materials)
Antioxidants
antioxidants
1 Citations

Negatively Supercharging Cellulases Render Them Lignin-Resistant

Whitehead, T. A., Bandi, C. K., Berger, M., Park, J. & Chundawat, S. P. S. Jul 3 2017 In : ACS Sustainable Chemistry and Engineering. 5, 7, p. 6247-6252 6 p.

Research output: Contribution to journalArticle

Cellulases
Lignin
lignin
Proteins
Cellulose