Center for Microbial Ecology

Profile The profile is based on mining the text of the scientific documents related to the associated experts. Based on that an index of weighted terms is created, which defines the key subjects of research unit

Metagenomics Medicine & Life Sciences
Databases Medicine & Life Sciences
tundra soil Earth & Environmental Sciences
gene Earth & Environmental Sciences
Genome Medicine & Life Sciences
Untranslated RNA Medicine & Life Sciences
Microbial Drug Resistance Medicine & Life Sciences
Nucleic Acid Databases Medicine & Life Sciences

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Publications 2006 2018

  • 18 Article
  • 2 Review article
  • 1 Conference contribution
1 Citations

How much do rRNA gene surveys underestimate extant bacterial diversity?

Rodriguez-R, L. M., Castro, J. C., Kyrpides, N. C., Cole, J. R., Tiedje, J. M. & Konstantinidis, K. T. Mar 1 2018 In : Applied and Environmental Microbiology. 84, 6, e00014-18

Research output: Contribution to journalArticle

rRNA Genes
ribosomal RNA

Nonpareil 3: Fast estimation of metagenomic coverage and sequence diversity

Rodriguez-R, L. M., Gunturu, S., Tiedje, J. M., Cole, J. R. & Konstantinidis, K. T. May 1 2018 In : mSystems. 3, 3, e00039-18

Research output: Contribution to journalArticle

application coverage
microbial community
microbial communities
2 Citations

Isothermal assay targeting class 1 integrase gene for environmental surveillance of antibiotic resistance markers

Stedtfeld, R. D., Stedtfeld, T. M., Waseem, H., Fitschen-Brown, M., Guo, X., Chai, B., Williams, M. R., Shook, T., Logan, A., Graham, A., Chae, J. C., Sul, W. J., VanHouten, J., Cole, J. R., Zylstra, G. J., Tiedje, J. M., Upham, B. L. & Hashsham, S. A. Aug 1 2017 In : Journal of Environmental Management. 198, p. 213-220 8 p.

Research output: Contribution to journalArticle

antibiotic resistance